National Biomedical Electron Paramagnetic Resonance Center

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Antholine WE, Subczynski WK. Saturation recovery EPR of square planar cupric complexes. Curr. Top. Biophys. 29:25-29 (2005).

Azarov I, Huang KT, Basu S, Gladwin MT, Hogg N, Kim-Shapiro DB. Nitric oxide scavenging by red blood cells as a function of hematocrit and oxygenation. J. Biol. Chem. 280:39024-39032 (2005).

Breece RM, Costello A, Bennett B, Sigdel TK, Matthews ML, Tierney DL, Crowder MW. A five-coordinate metal center in Co(II)-substituted VanX. J. Biol. Chem. 280:11074-11081 (2005).

Brown EC, York JT, Antholine WE, Ruiz E, Alvarez S, Tolman WB. [Cu3(u-S)2]3+ clusters supported by N-donor ligands: Progress toward a synthetic model of the catalytic site of nitrous oxide reductase. J. Am. Chem. Soc. 127:13752-13753 (2005).

Buchaklian, A.H., Klug, C.S.  (2005)  Characterization of the Walker A Motif of MsbA Using Site-Directed Spin Labeling EPR Spectroscopy.  Biochemistry 44, 5503-5509.

Bzymek, K. P., Moulin, A., Swierczek, S. I., Ringe, D., Petsko, G. A., Bennett, B., Holz, R. C.: Kinetic, Spectroscopic, and X-ray Crystallographic Characterization of the Functional E151H Aminopeptidase from Aeromonas proteolytica. Biochemistry 44:12030-12040, 2005.

Bzymek, K. P., Swierczek, S. I., Bennett, B., Holz, R. C.: Spectroscopic and Thermodynamic Characterization of the E151D and E151A Altered Leucine Aminopeptidases from Aeromonas proteolytica. Inorg. Chem. 44:8574-8580, 2005.

Chattopadhyay M, Walter ED, Newell DJ, Jackson PJ, Aronoff-Spencer E, Peisach J, Gerfen GJ, Bennett B, Antholine WE, Millhauser GL. The octarepeat domain of the prion protein binds Cu(II) with three distinct coordination modes at pH 7.4. J Am Chem Soc. 2005 Sep 14;127(36):12647-56.  Abstract

Choi, D.W., Antholine, W.E., Do, Y.S., Semrau, J.D., Kisting, C.J., Kunz, R.C., Campbell, D., Rao, N., Hartsel, S.C., and DiSpirito. A.A.: Effect of Methanobactin on the Activity and Electron Paramagnetic Resonance Spectra of the Membrane-Associated Methane Monooxygenase in Methylococcus capsulatus Bath, Microbiology, 151(pt.10):3417-3426, 2005. Abstract

Copik, A.J., Nocek, B.P., Swierczek, S.I., Ruebush, S., Jang, S.B., Meng, L., D'souza, V.M., Peters, J.W., Bennett, B. and Holz, R.C. EPR and X-ray Crystallographic Characterization of the Product-Bound Form of the MnII-Loaded Methionyl Aminopeptidase from Pyrococcus furiosus. Biochemistry 44, 121-129 (2005).

Copik, A.J., Waterson, S., Swierczek, S.I., Bennett, B. and Holz, R.C.: Both Nucleophile and Substrate Bind to the Catalytic Fe(II)-Center in the Type-II Methionyl Aminopeptidase from Pyrococcus furiosus. Inorg. Chem. 44:1160-1162, 2005.

Crawford, P.A., Yang, K-W, Sharma, N., Bennett, B. and Crowder, M.W.: Spectroscopic Studies on Co(II)-Substituted Metallo-b-lactamase ImiS from Aeromonas veronii bv. sobria. Biochemistry 44:5168-5176, 2005.

Dhanasekaran, A., Kotamraju, S., Karunakaran, C., Kalivendi, S.V., Thomas, S., Joseph, J., Kalyanaraman, B.: Mitochondria superoxide dismutase mimetic inhibits peroxide-induced oxidative damage and apoptosis: role of mitochondrial superoxide. Free Radic. Biol. Med. 39:567-583, 2005.

Duranski, M.R., Greer, J.K., Dejam, A., Sathya, J., Hogg, N., Langston, W., Kevil, C.G., Patel, R.P., Gladwin, M.T., Lefer, D.J.: Cytoprotective effects of nitrite during ischemia-reperfusion of the heart and liver. Journal of Clinical Investigation, 115(5):1232-1240, 2005.

D'souza, V.M., Brown, R.S., Bennett, B. and Holz, R.C. Characterization of the active site and insight into the binding mode of the anti-angiogenesis agent fumagillin to the manganese(II)-loaded methionyl aminopeptidase from Escherichia coli. J. Biol. Inorg. Chem. 10, 41-50 (2005).

Everson, C.E., Laatsch, C.D., Hogg, N. Antioxidant defense responses to sleep loss and sleep recovery. Am J Physiol Regul Integr Comp Physiol. 288(2), R374-383 (2005).

Garrity, J.D., Bennett, B. and Crowder, M.W. Direct Evidence That the Reaction Intermediate of Metallo-?Ò-lactamase L1 is Metal Bound. Biochemistry 44, 1078-1087 (2005).

Gladwin, M.T., Schechter, A.N., Kim-Shapiro, D.B., Patel, R.P., Hogg, N. Shiva, S., Cannon, R.O., Kelm, M., Wink, D., Espey, M.G., Oldfield, E., Pluta, R.M., Freeman, B., Lancaster, J., Feelisch, M., Lundberg, J.O.: Corrigendum: The emerging biology of the nitrite anion. Nat Chem Biol. 2005 Nov;1(6):308-14.   Abstract

Huang, K.T., Keszler, A., Patel, N., Patel, R.P., Gladwin, M.T., Kim-Shapiro, D.B., Hogg, N.: The reaction between nitrite and deoxyhemoglobin: Reassessment of reaction kinetics and stoichiometry. Journal of Biological Chemistry, 280:31126-31131, 2005.

Huang Z, Shiva S, Kim-Shapiro DB, Patel RP, Ringwood LA, Irby CE, Huang KT, Ho C, Hogg N, Schechter AN, Gladwin MT  Enzymatic function of hemoglobin as a nitrite reductase that produces NO under allosteric control.  J Clin Invest. 2005 Aug;115(8):2099-107. Epub 2005 Jul 21.  Abstract

Jeffers, A., Xu, X., Cho, M., Hogg, N. Patel, R.P., Gladwin, M.T., Kim-Shapiro, D.B.: Hemoglobin mediated nitrite activation of soluble guanylyl cyclase. Comparative Physiology and Biochemistry. Part A, 142:130-135, 2005.

Kalivendi, S., Hatakeyama, K., Whitsett, J., Konorev, E., Kalyanaraman, B., Vasquez-Vivar, J.: Changes in tetrahydrobiopterin levels in endothelial cells and adult cardiomyocytes induced by LPS and hydrogen peroxide--A role for GFRP? Free Radic. Biol. Med. 38: 481-491, 2005.

Kalivendi, S.V., Konorev, E.A., Cunningham, S., Vanamala, S.K., Kaji, E.H., Joseph, J., Kalyanaraman, B.: Doxorubicin activates nuclear factor of activated T-lymphocytes and Fas ligand transcription:  role of mitochondrial reactive oxygen species and calcium. Biochem. J. 389:527-539, 2005.

Karunakaran, C., Zhang, H., Crow, J.P., Antholine, W.E., Kalyanaraman, B.: Thiol Oxidase Activity of Copper, Zinc Superoxide Dismutase Bicarbonate-Dependent Peroxidase Activity: Intermediacy of Carbonate Anion Radical, Chem. Res. Toxicol., 18(3):494-500, 2005.

Karunakaran, C., Zhang, H., Joseph, J., Antholine, W.E., Kalyanaraman, B.: Thiol oxidase activity of copper, zinc superoxide dismutase stimulates bicarbonate-dependent peroxidase activity via formation of a carbonate radical. Chem. Res. Toxicol. 18:494-500, 2005.

Kim-Shapiro, D.B., Gladwin, M.T., Patel, R.P., Hogg, N. The reaction between nitrite and hemoglobin: The role of nitrite in hemoglobin-mediated hypoxic vasodilation. J Inorg. Biochem., 99(1), 237-246 (2005).

Klug, C.S., Camenisch, T.G., Hubbell, W.L., Hyde, J.S.  (2005) Multiquantum EPR Spectroscopy of Spin Labeled Arrestin K267C at 35GHz.  Biophys. J. 88, 3641-3647.

Kotamraju, S., Kalivendi, S.V., Konorev, E., Chitambar, C.R, Joseph, J., Kalyanaraman, B.  Oxidant-Induced Iron Signaling in Doxorubicin-Mediated Apoptosis.  Methods in Enzymology, 378:362-382, 2004.

Kotamraju, S., Kalivendi, S., Shang, T., Kalyanaraman, B.: Nitric oxide, proteasomal function, and iron homeostasis – implications in aging and neurodegenerative diseases. Methods Enzymol. 396:526-534, 2005.

McGregor, W. C., Swierczek, S. I., Bennett, B., Holz, R. C.: argE-encoded N-acetyl-L-ornithine Deacetylase from Escherichia coli contains a Dinuclear Metallo-Active Site. J. Am. Chem. Soc. 127:14100-14107, 2005.

Marasinghe, G. P. K., Sander, I. M., Bennett, B., Periyannan, G. P., Yang, K-W., Makaroff, C. A., Crowder, M. W.: Structural Studies on a Mitochondrial Glyoxylase II. J. Biol. Chem. 280:40668-40675, 2005.

Mett RR, Anderson JR, Sidabras JW, Hyde JS. Electron paramagnetic resonance field-modulation eddy-current analysis of silver-plated graphite resonators.  Review of Scientific Instruments 76, 094702 (2005) 

Mett RR, Sidabras JW, Hyde JS.  Radio Frequency Skin Depth Concepts in Magnetic Resonance. Current Topics in Biophysics.  2005, 29 (2-1): 83-88.

Mett, R.R. and Hyde, J.S., Microwave leakage from field modulation stots in TE011electron paramagnetic resonance cavities.  Review of Scientific Instruments 76, 014702 (2005)

Pieper GM, Nilakantan V, Halligan NLN, Khanna AK, Hilton G, Vásquez-Vivar J (2005) Nitric oxide formation in acutely-rejecting cardiac allografts correlates with GTP cyclohydrolase I activity.  Biochem J. 2005 Nov 1;391(Pt 3):541-7.   Abstract

Pieper, G.M., Nilakantan, V., Zhou, X., Khanna, A.K., Johnson, C.P., Roza, A.M., Adams, M.B., Hilton, G., Felix, C.C. Treatment with {alpha}-Phenyl-N-tert-butylnitrone, a Free Radical-Trapping Agent, Abrogates Inflammatory Cytokine Gene Expression during Alloimmune Activation in Rat Cardiac Allografts. J Pharmacol Exp Ther. 312(2), 774-779 (2005).

Piknova, B., Gladwin, M.T., Schechter, A.N., Hogg, N.: Electron paramagnetic resonance analysis of nitrosylhemoglobin in humans during NO inhalation. J Biol Chem. 2005 Dec 9;280(49):40583-8. Epub 2005 Sep 23. Abstract

Porter R, Jáchymová M, Martásek P, Kalyanaraman B, Vásquez-Vivar J. (2005) Reductive activation of Cr(VI) by nitric oxide synthase: potential mechanism for diseases linked to air pollution. Chemical Research in Toxicology 18:864-843

Sato, H., Feix, J.B., Hillard, C.J., Frank, D.F.: Characterization of phospholipase activity of the Pseudomonas aeruginosa Type III toxin, Exo U. J. Bacteriology 187:1192-1195, 2005. Abstract

Schopfer, F.J., Giles, G., Baker, P.R.S., Chumley, P., Patel, R.P., Hogg, N., Blanchard, B.P., Lancaster, J.R., Freeman, B.A.: Fatty acid transduction of nitric oxide signaling: Nitrolinoleic acid is a hydrophobically stabilized nitric oxide donor. J Biological Chemistry, 280:19289-19297, 2005.

Shang, T., Joseph, J., Hillard, C.J., Kalyanaraman, B.: Death-associated protein kinase as a sensor of mitochondrial membrane potential – Role of lysosome in mitochondrial toxin induced cell death. J. Biol. Chem. 280:34644-34653, 2005.  Abstract

Shang, T., Kotamraju, S., Zhao, H., Kalivendi, S.V., Hillard, C.J., Kalyanaraman, B.:  Sepiapterin attenuates 1-methyl-4-phenylpyridinium-induced apoptosis in neuroblastoma cells transfected with neuronal NOS: Role of tetrahydrobiopterin, nitric oxide, and proteasome activation. Free Radic Biol Med. 39:1059-1074, 2005.  Abstract

Shi, Y., Hutchins, W.C., Su, J., Siker, D., Hogg, N., Pritchard Jr., K.A., Baker, J.E. Delayed cardioprotection with isoflurane: Triggering role of reactive oxygen and nitrogen species. Am. J Physiol. Heart Circ. Physiol. 288(1), H175-184 (2005).

Sidabras, J.W., Mett, R.R. and Hyde, J.S. Aqueous flat-cells perpendicular to the electric field for use in electron paramagnetic resonance spectroscopy, II:  Journal of Magnetic Resonance, Volume 172, Issue 2, February 2005, Pages 333-341 Abstract

Subczynski WK, Felix CC, Klug CS, Hyde JS.  Concentration by centrifugation for gas exchange EPR oximetry measurements with loop-gap resonators. J Magn Reson. 2005 Jul 21; [Epub ahead of print]   Abstract

Subczynski WK, Wisniewska A, Kusumi A, McElhaney RN. Effects of pH-induced variations of the charge of the transmembrane alpha-helical peptide Ac-K(2)(LA)(12)K(2)-amide on the organization and dynamics of the host dimyristoylphosphatidylcholine bilayer membrane. Biochim Biophys Acta. 2005 Dec 30;1720(1-2):99-109. Epub 2005 Dec 27.  Abstract

Wisniewska, A., Subczynski, W.K.: Lipid Domains:  EPR Discrimination by Oxygen Transport. Current Topics in Biophysics.  2005, 29 (2-1): 55-60.

Zhang, H., Joseph, J., Kalyanaraman, B.: Hydrophobic tyrosyl probes for monitoring nitration reactions in membranes. Methods Enzymol. 396:182-204, 2005.

Zhang, Y., Hogg, N. S-Nitrosothiols: Cellular formation and transport. Free Radic. Biol. Med. 38(7):831-838, 2005.

Zhang, Y., Keszler, A., Broniowska, K.A., Hogg, N.: Characterization and application of the biotin switch assay for the identification of S-nitrosated proteins. Free Radicals in Biology and Medicine 38:874-881, 2005.

Zhang H, Xu Y, Joseph J, Kalyanaraman B. Intramolecular electron transfer between tyrosyl radical and cysteine residue inhibits tyrosine nitration and induces thiyl radical formation in model peptides treated with myeloperoxidase, H2O2, and NO2-: EPR SPIN trapping studies. J Biol Chem. 2005 Dec 9;280(49):40684-98. Epub 2005 Sep 21.   Abstract
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