National Biomedical Electron Paramagnetic Resonance Center

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2012

Bansal S, Srinivasan S, Anandasadagopan S, Chowdhury AR, Selvaraj V, Kalyanaraman B, Joseph J, Avadhani NG. Additive effects of mitochondria-targeted cytochrome CYP2E1 and alcohol toxicity on cytochrome c oxidase function and stability of respirasome complexes.J Biol Chem. 2012 May 4;287(19):15284-97. Epub 2012 Mar 6.

Broniowska KA, Hogg N. The Chemical Biology of S-Nitrosothiols. Antioxid Redox Signal. 2012 Oct 1;17(7):969-80. Epub 2012 Jun 7.

Broniowska KA, Keszler A, Basu S, Kim-Shapiro DB, Hogg N. Cytochrome c-mediated formation of S-nitrosothiol in cells. Biochem J. 2012 Feb 15;442(1):191-7.

Cheng G, Zielonka J, Dranka BP, McAllister D, Mackinnon AC Jr, Joseph J, Kalyanaraman B.  Mitochondria-targeted drugs synergize with 2-deoxyglucose to trigger breast cancer cell death. Cancer Res. 2012 May 15;72(10):2634-44. Epub 2012 Mar 19.

Cunniff B, Benson K, Stumpff J, Newick K, Held P, Taatjes D, Joseph J, Kalyanaraman B, Heintz NH.  Mitochondrial-targeted nitroxides disrupt mitochondrial architecture and inhibit expression of peroxiredoxin 3 and FOXM1 in malignant mesothelioma cells.  J Cell Physiol. 2012 Sep 27. doi: 10.1002/jcp.24232. [Epub ahead of print]

Diers AR, Broniowska KA, Chang CF, Hogg N. Pyruvate fuels mitochondrial respiration and proliferation of breast cancer cells: effect of monocarboxylate transporter inhibition. Biochem J. 2012 Jun 15;444(3):561-71.

Dranka BP, Zielonka J, Kanthasamy AG, Kalyanaraman B. Alterations in bioenergetic function induced by Parkinson's disease mimetic compounds: lack of correlation with superoxide generation. J Neurochem. 2012 Jun 18. doi: 10.1111/j.1471-4159.2012.07836.x. [Epub ahead of print]

Drobyshevsky A, Luo K, Derrick M, Yu L, Du H, Prasad PV, Vasquez-Vivar J, Batinic-Haberle I, Tan S. Motor deficits are triggered by reperfusion-reoxygenation injury as diagnosed by MRI and by a mechanism involving oxidants. J Neurosci. 2012 Apr 18;32(16):5500-9.

Francis, D.J., Hubbell, W.L., Klug, C.S.   Probing Protein Secondary Structure using EPR: Investigating a Dynamic Region of Visual Arrestin. Appl. Magn. Reson.  2012, Volume 43, Number 3, Pages 405-419

Gadicherla AK, Stowe DF, Antholine WE, Yang M, Camara AK. Damage to mitochondrial complex I during cardiac ischemia reperfusion injury is reduced indirectly by anti-anginal drug ranolazine. Biochim Biophys Acta. 2012 Mar;1817(3):419-29. Epub 2011 Dec 8.

Ghosh A, Kanthasamy A, Joseph J, Anantharam V, Srivastava P, Dranka BP, Kalyanaraman B, Kanthasamy AG.  Anti-inflammatory and neuroprotective effects of an orally active apocynin derivative in pre-clinical models of Parkinson's disease.  J Neuroinflammation. 2012 Oct 23;9:241. doi: 10.1186/1742-2094-9-241.

Kalyanaraman B, Darley-Usmar V, Davies KJ, Dennery PA, Forman HJ, Grisham MB, Mann GE, Moore K, Roberts LJ 2nd, Ischiropoulos H. Measuring reactive oxygen and nitrogen species with fluorescent probes: challenges and limitations. Free Radic Biol Med. 2012 Jan 1;52(1):1-6. Epub 2011 Oct 2.

Kittell AW, Hustedt EJ, Hyde JS. Inter-spin distance determination using L-band (1-2GHz) non-adiabatic rapid sweep electron paramagnetic resonance (NARS EPR).  J Magn Reson. 2012 Aug;221:51-6. Epub 2012 May 15.

Liddle BJ, Wanniarachchi S, Hewage JS, Lindeman SV, Bennett B, Gardinier JR. Electronic communication across diamagnetic metal bridges: a homoleptic gallium(III) complex of a redox-active diarylamido-based ligand and its oxidized derivatives. Inorg Chem. 2012 Dec 3;51(23):12720-8. doi: 10.1021/ic301437f. Epub 2012 Nov 19. PMID:23163736 [PubMed - in process]

Mainali L, Raguz M, O'Brien WJ, Subczynski WK. Properties of fiber cell plasma membranes isolated from the cortex and nucleus of the porcine eye lens.Exp Eye Res. 2012 Apr;97(1):117-29. Epub 2012 Feb 2.

Mainali L, Raguz M, Subczynski WK. Phases and domains in sphingomyelin-cholesterol membranes: structure and properties using EPR spin-labeling methods. Eur Biophys J. 2012 Feb;41(2):147-59. Epub 2011 Oct 28.

Mao M, Sudhahar V, Ansenberger-Fricano K, Fernandes DC, Tanaka LY, Fukai T, Laurindo FR, Mason RP, Vasquez-Vivar J, Minshall RD, Stadler K, Bonini MG. Nitroglycerin drives endothelial nitric oxide synthase activation via the phosphatidylinositol 3-kinase/protein kinase B pathway. Free Radic Biol Med. 2012 Jan 15;52(2):427-35. Epub 2011 Oct 7.

Merten JA, Schultz KM, Klug CS. Concentration-dependent oligomerization and oligomeric arrangement of LptA. Protein Sci. 2012 Feb;21(2):211-8. doi: 10.1002/pro.2004. Epub 2011 Dec 21.

Michalski R, Zielonka J, Hardy M, Joseph J, Kalyanaraman B.  Hydropropidine: A novel, cell-impermeant fluorogenic probe for detecting extracellular superoxide.  Free Radic Biol Med. 2012 Oct 7. doi:pii: S0891-5849(12)01143-4. 10.1016/j.freeradbiomed.2012.09.018. [Epub ahead of print]

Mukhopadhyay P, Horváth B, Zsengellėr Z, Bátkai S, Cao Z, Kechrid M, Holovac E, Erdėlyi K, Tanchian G, Liaudet L, Stillman IE, Joseph J, Kalyanaraman B, Pacher P. Mitochondrial reactive oxygen species generation triggers inflammatory response and tissue injury associated with hepatic ischemia-reperfusion: Therapeutic potential of mitochondrially targeted antioxidants. Free Radic Biol Med. 2012 Sep 1;53(5):1123-38. Epub 2012 Jun 6.

Mukhopadhyay P, Horváth B, Zsengellér Z, Zielonka J, Tanchian G, Holovac E, Kechrid M, Patel V, Stillman IE, Parikh SM, Joseph J, Kalyanaraman B, Pacher P.  Mitochondrial-targeted antioxidants represent a promising approach for prevention of cisplatin-induced nephropathy. Free Radic Biol Med. 2012 Jan 15;52(2):497-506. Epub 2011 Nov 10.

Petruk AA, Bartesaghi S, Trujillo M, Estrin DA, Murgida D, Kalyanaraman B, Marti MA, Radi R.  Molecular basis of intramolecular electron transfer in proteins during radical-mediated oxidations: Computer simulation studies in model tyrosine-cysteine peptides in solution.  Arch Biochem Biophys. 2012 Sep 1;525(1):82-91. Epub 2012 May 26.

Plesnar E, Subczynski WK, Pasenkiewicz-Gierula M. Saturation with cholesterol increases vertical order and smoothes the surface of the phosphatidylcholine bilayer: A molecular simulation study. Biochim Biophys Acta. 2012 Mar;1818(3):520-9. Epub 2011 Oct 29.

Sethumadhavan S, Vasquez-Vivar J, Migrino RQ, Harmann L, Jacob HJ, Lazar J. Mitochondrial DNA variant for complex I reveals a role in diabetic cardiac remodeling. J Biol Chem. 2012 Jun 22;287(26):22174-82. Epub 2012 Apr 27.

Soberanes S, Gonzalez A, Urich D, Chiarella SE, Radigan KA, Osornio-Vargas A, Joseph J, Kalyanaraman B, Ridge KM, Chandel NS, Mutlu GM, De Vizcaya-Ruiz A, Budinger GR.  Particulate matter Air Pollution induces hypermethylation of the p16 promoter Via a mitochondrial ROS-JNK-DNMT1 pathway. Sci Rep. 2012;2:275. Epub 2012 Feb 17.

Subczynski WK, Raguz M, Widomska J, Mainali L, Konovalov A. Functions of cholesterol and the cholesterol bilayer domain specific to the fiber-cell plasma membrane of the eye lens. J Membr Biol. 2012 Jan;245(1):51-68. Epub 2011 Dec 30.

Subczynski WK, Wisniewska-Becker A, Widomska J. Can macular xanthophylls replace cholesterol in formation of the liquid-ordered phase in lipid bilayer membranes? Acta Biochim Pol. 2012;59(1):109-14. Epub 2012 Mar 17.

Swartz HM, Flood AB, Williams BB, Dong R, Swarts SG, He X, Grinberg O, Sidabras J, Demidenko E, Gui J, Gladstone DJ, Jarvis LA, Kmiec MM, Kobayashi K, Lesniewski PN, Marsh SD, Matthews TP, Nicolalde RJ, Pennington PM, Raynolds T, Salikhov I, Wilcox DE, Zaki BI. Electron paramagnetic resonance dosimetry for a large-scale radiation incident.Health Phys. 2012 Sep;103(3):255-67. doi: 10.1097/HP.0b013e3182588d92. PMID:22850230 [PubMed - indexed for MEDLINE]

Tejero J, Basu S, Helms C, Hogg N, King SB, Kim-Shapiro DB, Gladwin MT. Low NO concentration dependence of reductive nitrosylation reaction of hemoglobin. J Biol Chem. 2012 May 25;287(22):18262-74. Epub 2012 Apr 4.

Wang J, Alexanian A, Ying R, Kizhakekuttu TJ, Dharmashankar K, Vasquez-Vivar J, Gutterman DD, Widlansky ME. Acute Exposure to Low Glucose Rapidly Induces Endothelial Dysfunction and Mitochondrial Oxidative Stress: Role for AMP Kinase. Arterioscler Thromb Vasc Biol. 2012 Mar;32(3):712-20. Epub 2011 Dec 29.

Wisniewska-Becker A, Nawrocki G, Duda M, Subczynski WK. Structural aspects of the antioxidant activity of lutein in a model of photoreceptor membranes.Acta Biochim Pol. 2012;59(1):119-24. Epub 2012 Mar 17.

Yin JJ, Fu PP, Lutterodt H, Zhou YT, Antholine WE, Wamer W.  Dual Role of Selected Antioxidants Found in Dietary Supplements: Crossover between Anti- and Pro-Oxidant Activities in the Presence of Copper.J Agric Food Chem. 2012 Mar 14;60(10):2554-61. [Epub ahead of print]

Zielonka J, Sikora A, Hardy M, Joseph J, Dranka BP, Kalyanaraman B. Boronate Probes as Diagnostic Tools for Real Time Monitoring of Peroxynitrite and Hydroperoxides. Chem Res Toxicol. 2012 Sep 17;25(9):1793-9. Epub 2012 Jun 25.

Zielonka J, Zielonka M, Sikora A, Adamus J, Joseph J, Hardy M, Ouari O, Dranka BP, Kalyanaraman B.  Global Profiling of Reactive Oxygen and Nitrogen Species in Biological Systems: HIGH-THROUGHPUT REAL-TIME ANALYSES. J Biol Chem. 2012 Jan 27;287(5):2984-95. Epub 2011 Dec 4.

Zsengellér ZK, Ellezian L, Brown D, Horváth B, Mukhopadhyay P, Kalyanaraman B, Parikh SM, Karumanchi SA, Stillman IE, Pacher P.  Cisplatin nephrotoxicity involves mitochondrial injury with impaired tubular mitochondrial enzyme activity.  J Histochem Cytochem. 2012 Jul;60(7):521-9. Epub 2012 Apr 17.

 

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