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Selected MRI Publications

 James S. Hyde
 Selected EPR Publications




Jesmanowicz A, Nencka A, Hyde JS.  Direct radiofrequency phase control in MRI by digital waveform playback at the Larmor frequency. Magn Reson Med. 2013 Mar 6. doi: 10.1002/mrm.24713. [Epub ahead of print] PMID: 23468035

Li R, Hettinger PC, Machol JA, Liu X, Stephenson JB, Pawela CP, Yan JG, Matloub HS, Hyde JS.  Cortical plasticity induced by different degrees of peripheral nerve injuries: a rat functional magnetic resonance imaging study under 9.4 Tesla.  J Brachial Plex Peripher Nerve Inj. 2013 May 9;8(1):4. doi: 10.1186/1749-7221-8-4.  PMID:  236597  Free PMC Article

Li R, Machol JA 4th, Liu X, Hettinger PC, Flugstad NA, Yan JG, Matloub HS, Hyde JS.  C7 nerve root sensory distribution in peripheral nerves: A BOLD fMRI investigation at 9.4T.  Muscle Nerve. 2013 Apr 5. doi: 10.1002/mus.23864. [Epub ahead of print] PMID: 23558801


Hyde JS, Jesmanowicz A.  Cross-correlation: an fMRI signal-processing strategy. Neuroimage. 2012 Aug 15;62(2):848-51. PMID: 22051223  Free PMC Article


Hettinger PC, Li R, Yan JG, Cho YR, Sanger J, Dzwierzynski W, Pawela CP, Hyde JS, Matloub HS.  Refining the sensory and motor ratunculus of the rodent upper extremity: evaluation of the C7 nerve root using fMRI and direct nerve stimulation.  Hand (N Y). 2011 Jun;6(2):194-201. doi: 10.1007/s11552-011-9319-7. Epub 2011 Feb 19.  PMID: 22654704  Free PMC Article

Hettinger PC, Li R, Yan JG, Matloub HS, Cho YR, Pawela CP, Rowe DB, Hyde JS.  Long-term vascular access ports as a means of sedative administration in a rodent fMRI survival model. J Neurosci Methods. 2011 Sep 15;200(2):106-12.  PMID: 21726581 Free PMC Article

Pawela CP, Biswal BB, Hudetz AG, Li R, Jones SR, Cho YR, Matloub HS, Hyde JS.  Interhemispheric neuroplasticity following limb deafferentation detected by resting-state functional connectivity magnetic resonance imaging (fcMRI) and functional magnetic resonance imaging (fMRI).  Neuroimage. 2010 Feb 1;49(3):2467-78. Epub 2009 Sep 28.


Biswal BB, Mennes M, Zuo XN, Gohel S, Kelly C, Smith SM, Beckmann CF, Adelstein JS, Buckner RL, Colcombe S, Dogonowski AM, Ernst M, Fair D, Hampson M, Hoptman MJ, HYDE JS, Kiviniemi VJ, Kötter R, Li SJ, Lin CP, Lowe MJ, Mackay C, Madden DJ, Madsen KH, Margulies DS, Mayberg HS, McMahon K, Monk CS, Mostofsky SH, Nagel BJ, Pekar JJ, Peltier SJ, Petersen SE, Riedl V, Rombouts SA, Rypma B, Schlaggar BL, Schmidt S, Seidler RD, J Siegle G, Sorg C, Teng GJ, Veijola J, Villringer A, Walter M, Wang L, Weng XC, Whitfield-Gabrieli S, Williamson P, Windischberger C, Zang YF, Zhang HY, Castellanos FX, Milham MP. Toward discovery science of human brain function. Proc. Natl. Acad. Sci. USA 107:4734-4739 (2010).

HYDE JS, Strangeway RA, Camenisch TG, Ratke JJ, Froncisz W. W-band frequency-swept EPR. J. Magn. Reson. 205:93-101 (2010).

Pawela CP, Biswal BB, Hudetz AG, Li R, Jones SR, Cho YR, Matloub HS, HYDE JS. Interhemispheric neuroplasticity following limb deafferentation detected by resting-state functional connectivity magnetic resonance imaging (fcMRI) and functional magnetic resonance imaging (fMRI). Neuroimage 49:2467-2478 (2010).


Pawela CP, Biswal BB, Hudetz AG, Schulte ML, Li R, Jones SR, Cho YR, Matloub HS, HYDE JS. A protocol for use of medetomidine anesthesia in rats for extended studies using task-induced BOLD contrast and resting-state functional connectivity. Neuroimage 46:1137-1147 (2009).


Cho YR, Jones SR, Pawela CP, Li R, Kao DS, Schulte ML, Runquist ML, Yan JG, Hudetz AG, Jaradeh SS, HYDE JS, Matloub HS. Cortical brain mapping of peripheral nerves using functional magnetic resonance imaging in a rodent model. J. Reconstr. Microsurg. 24:551-557 (2008).

Kao DS, Soltysik DA, HYDE JS, Gosain AK. Magnetic resonance imaging as an aid in the dynamic assessment of the velopharyngeal mechanism in children. Plast. Reconstr. Surg. 122:572-577 (2008).

Pawela CP, Biswal BB, Cho YR, Kao DS, Li R, Jones SR, Schulte ML, Matloub HS, Hudetz AG, HYDE JS. Resting-state functional connectivity of the rat brain. Magn. Reson. Med. 59:1021-1029 (2008).

Pawela CP, Hudetz AG, Ward BD, Schulte ML, Li R, Kao DS, Mauck MC, Cho YR, Neitz J, HYDE JS. Modeling of region-specific fMRI BOLD neurovascular response functions in rat brain reveals residual differences that correlate with the differences in regional evoked potentials. Neuroimage 41:525-534 (2008).

Soltysik DA, HYDE JS. High spatial resolution increases the specificity of block-design BOLD fMRI studies of overt vowel production. Neuroimage 41:389-397 (2008).


Cho YR, Pawela CP, Li R, Kao D, Schulte M, Runquist M, Yan J-G, Matloub HS, Jaradeh SS, Hudetz AG, HYDE JS. Refining the sensory and motor ratunculus of the rat upper extremity using fMRI and direct nerve stimulation. Magn. Reson. Med. 58:901-909 (2007).


Bennett KM, HYDE JS, Schmainda KM. Water diffusion heterogeneity index in the human brain is insensitive to the orientation of applied magnetic field gradients. Magn. Reson. Med. 56: 235-239 (2006).

Mazaheri Y, Biswal BB, Ward BD, HYDE JS. Measurements of tissue T1 spin-lattice relaxation time and discrimination of large draining veins using transient EPI data sets in BOLD-weighted fMRI acquisitions. Neuroimage 32:603-615 (2006).

Schulte ML, Li S-J, HYDE JS, Hudetz AG. Digit tapping model of functional activation in the rat somatosensory cortex. J. Neurosci. Meth. 157:48-53 (2006).

Soltysik DA, HYDE JS. Strategies for block-design fMRI experiments during task-related motion of structures of the oral cavity. Neuroimage 29:1260-1271 (2006).


Lu H, Soltysik DA, Ward BD, HYDE JS. Temporal evolution of the CBV-fMRI signal to rat whisker stimulation of variable duration and intensity: A linearity analysis. Neuroimage 26:432-440 (2005).


Bennett KM, HYDE JS, Rand SD, Bennett RT, Krouwer HGJ, Rebro KJ, Schmainda KM. Intravoxel distribution of DWI decay rates reveals C6 glioma invasion in rat brain. Magn. Reson. Med. 52:994-1004 (2004).

Kern MK, Arndorfer RC, HYDE JS, Shaker R. Cerebral cortical representation of external anal sphincter contraction: Effect of effort. Am. J. Physiol. Gastrointest. Liver Physiol. 286:G304-G311 (2004).

Lu H, Jesmanowicz A, Li S-J, HYDE JS. Momentum-weighted conjugate gradient descent algorithm for gradient coil optimization. Magn. Reson. Med. 51:158-164 (2004).

Lu H, Patel S, Luo F, Li S-J, Hillard CJ, Ward BD, HYDE JS. Spatial correlations of laminar BOLD and CBV responses to rat whisker stimulation with neuronal activity localized by Fos expression. Magn. Reson. Med. 52:1060-1068 (2004).


Bennett KM, Schmainda KM, Bennett RT, Rowe DB, Lu H, HYDE JS. Characterization of continuously distributed cortical water diffusion rates with a stretched-exponential model. Magn. Reson. Med. 50:727-734 (2003).

Lu H, Mazaheri Y, Zhang R, Jesmanowicz A, HYDE JS. Multi-shot partial k-space EPI for high-resolution fMRI demonstrated in a rat whisker barrel stimulation model at 3T. Magn. Reson. Med. 50:1215-1222 (2003).

Roopchansingh V, Cox RW, Jesmanowicz A, Ward BD, HYDE JS. Single-shot magnetic field mapping embedded within echo-planar time course imaging. Magn. Reson. Med. 50:839-843 (2003).


Gosain AK, Birn RM, HYDE JS. Localization of the cortical response to smiling using new imaging paradigms with functional magnetic resonance imaging. Plast. Reconstr. Surg. 108:1136-1144 (2001).

Kern MK, Jaradeh S, Arndorfer RC, Jesmanowicz A, HYDE JS, Shaker R. Gender differences in the cortical representation of rectal distention in healthy humans. Am. J. Physiol. Gastrointest. Liver Physiol. 281:G1512-G1523 (2001).
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