Biophysics

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Selected Publications


 
Laviolette PS, Rand SD, Raghavan M, Ellingson BM, Schmainda KM, Mueller W.  3D Visualization of Subdural Electrodes for Presurgical Planning. Neurosurgery. 2010 Dec 30. [Epub ahead of print]
 
Ellingson BM, Laviolette PS, Rand SD, Malkin MG, Connelly JM, Mueller WM, Prost RW, Schmainda KM.  Spatially quantifying microscopic tumor invasion and proliferation using a voxel-wise solution to a glioma growth model and serial diffusion MRI. Magn Reson Med. 2011 Apr;65(4):1131-43
 
Ellingson BM, Malkin MG, Rand SD, Laviolette PS, Connelly JM, Mueller WM, Schmainda KM. Volumetric analysis of functional diffusion maps is a predictive imaging biomarker for cytotoxic and anti-angiogenic treatments in malignant gliomas. J Neurooncol. 2010 Aug 27. [Epub ahead of print]
 
Bedekar D, Jensen T, Schmainda KM.  Standardization of relative cerebral blood volume (rCBV) image maps for ease of both inter- and intrapatient comparisons. Magn Reson Med. 2010 Sep;64(3):907-13.
 
Ellingson BM, Malkin MG, Rand SD, Connelly JM, Quinsey C, LaViolette PS, Bedekar DP, Schmainda KM.  Validation of functional diffusion maps (fDMs) as a biomarker for human glioma cellularity.J Magn Reson Imaging. 2010 Mar;31(3):538-48.

Ellingson BM, Rand SD, Malkin MG, SCHMAINDA KM. Utility of functional diffusion maps to monitor a patient diagnosed with gliomatosis cerebri. J Neurooncol. 2010 May;97(3):419-23. Epub 2009 Oct 8.

Jensen TR, SCHMAINDA KM. Computer-aided detection of brain tumor invasion using multiparametric MRI. J. Magn. Reson. Imaging 30:481-489 (2009).

Ellingson BM, Schmit BD, Gourab K, Sieber-Blum M, Hu YF, SCHMAINDA KM. Diffusion heterogeneity tensor MRI (?-Dti): Mathematics and initial applications in spinal cord regeneration after trauma - biomed 2009. Biomed. Sci. Instrum. 45:167-172 (2009).

Pathak AP, Ward BD, SCHMAINDA KM. A novel technique for modeling susceptibility-based contrast mechanisms for arbitrary microvascular geometries: The finite perturber method. Neuroimage 40:1130-1143 (2008).

Paulson ES, SCHMAINDA KM. Comparison of dynamic susceptibility-weighted contrast-enhanced MR methods: Recommendations for measuring relative cerebral blood volume in brain tumors. Radiology 249:601-613 (2008).

Quarles CC, SCHMAINDA KM. Assessment of the morphological and functional effects of the anti-angiogenic agent SU11657 on 9L gliosarcoma vasculature using dynamic susceptibility contrast MRI. Magn Reson Med 57:680-687 (2007).

Bennett KM, Hyde JS, SCHMAINDA KM. Water diffusion heterogeneity index in the human brain is insensitive to the orientation of applied magnetic field gradients. Magn Reson Med 56:235-239 (2006).

Boxerman JL, SCHMAINDA KM, Weisskoff RM. Relative cerebral blood volume maps corrected for contrast agent extravasation significantly correlate with glioma tumor grade, whereas uncorrected maps do not. AJNR Am J Neuroradiol 27:859-867 (2006).

Quarles CC, Krouwer HG, Rand SD, SCHMAINDA KM. Dexamethasone normalizes brain tumor hemodynamics as indicated by dynamic susceptibility contrast MRI perfusion parameters. Technol Cancer Res Treat 4:245-249 (2005).

Quarles CC, Ward BD, SCHMAINDA KM. Improving the reliability of obtaining tumor hemodynamic parameters in the presence of contrast agent extravasation. Magn Reson Med 53:1307-1316 (2005).

Bennett KM, Hyde JS, Rand SD, Bennett R, Krouwer HG, Rebro KJ, SCHMAINDA KM. Intravoxel distribution of DWI decay rates reveals C6 glioma invasion in rat brain. Magn Reson Med 52:994-1004 (2004).

SCHMAINDA KM, Rand SD, Joseph AM, Lund R, Ward BD, Pathak AP, Ulmer JL, Badruddoja MA, Krouwer HG. Characterization of a first-pass gradient-echo spin-echo method to predict brain tumor grade and angiogenesis. AJNR Am J Neuroradiol 25:1524-1532 (2004); erratum in: AJNR Am J Neuroradiol 26:686 (2005).

Ulmer JL, Hacein-Bey L, Mathews VP, Mueller WM, DeYoe EA, Prost RW, Meyer GA, Krouwer HG, SCHMAINDA KM. Lesion-induced pseudo-dominance at functional magnetic resonance imaging: Implications for preoperative assessments. Neurosurgery 55:569-579; discussion 580-581 (2004).

Abu-Hajir M, Rand SD, Krouwer HG, SCHMAINDA KM. Noninvasive assessment of neoplastic angiogenesis: The role of magnetic resonance imaging. Semin Thromb Hemost 29:309-315 (2003).

Badruddoja MA, Krouwer HG, Rand SD, Rebro KJ, Pathak AP, SCHMAINDA KM. Antiangiogenic effects of dexamethasone in 9L gliosarcoma assessed by MRI cerebral blood volume maps. Neuro Oncol 5:235-243 (2003).

Bennett KM, SCHMAINDA KM, Bennett RT, Rowe DB, Lu H, Hyde JS. Characterization of continuously distributed cortical water diffusion rates with a stretched-exponential model. Magn Reson Med. 50:727-734 (2003).

Durbeej M, Sawatzki SM, Barresi R, SCHMAINDA KM, Allamand V, Michele DE, Campbell KP. Gene transfer establishes primacy of striated vs. smooth muscle sarcoglycan complex in limb-girdle muscular dystrophy. Proc Natl Acad Sci USA 100:8910-8915 (2003).

Pathak AP, Rand SD, SCHMAINDA KM. The effect of brain tumor angiogenesis on the in vivo relationship between the gradient-echo relaxation rate change (DeltaR2*) and contrast agent (MION) dose. J Magn Reson Imaging 18:397-403 (2003).

Garcia GH, SCHMAINDA KM, Ulmer JL, Harris GJ. Qualitative perfusion imaging of the human optic nerve. Ophthal Plast Reconstr Surg 18:107-113 (2002).

Kim YR, SCHMAINDA KM. Water exchange and inflow affect the accuracy of GRE blood volume measurements when using intravascular T1 contrast agents: Implications for the evaluation of tumor angiogenesis. Magn Reson Med 47:1110-1120 (2002).

Pathak AP, SCHMAINDA KM, Ward BD, Linderman JR, Rebro KJ, Greene AS. MR-derived cerebral blood volume maps: Issues regarding histological validation and assessment of tumor angiogenesis. Magn Reson Med 46:735-747 (2001).

Allamand V, DONAHUE (SCHMAINDA) KM, Straub V, Davisson RL, Davidson BL, Campbell KP. Early adenoviral-mediated gene transfer effectively prevents muscular dystrophy in alpha-sarcoglycan-deficient mice. Gene Therapy 7:1385-1991 (2000).

Butzen J, Prost R, Chetty V, DONAHUE (SCHMAINDA) KM, Neppl R, Bowen W, Li S-J, Haughton V, Mark L, Kim T, Mueller W, Meyer G, Krouwer H and Rand S. Discrimination between neoplastic and nonneoplastic brain lesions by use of MR spectroscopy: The limits of accuracy with a logistic regression model. Am J Neuroradiol 21:1213-1219 (2000).

DONAHUE (SCHMAINDA) KM, Krouwer HG, Rand SD, Pathak A, Marszalkowski C, Censky S, Prost RW. Utility of simultaneously-acquired gradient-echo and spin-echo cerebral blood volume and morphology maps in brain tumor patient. Magn Reson Med 43:845-853 (2000).

Kerschner JE, Cruz MJ, Beste DJ, DONAHUE (SCHMAINDA) KM, Kehl KS. CT vs. MR imaging of acute bacterial sinusitis: A rabbit model. Am J Otolaryngology 21:298-305 (2000).

Straub V, DONAHUE (SCHMAINDA) KM, Allamand V, Davisson RL, Kim YR, Campbell KP. Contrast-agent enhanced magnetic resonance imaging of skeletal muscle damage in animal models of muscular dystrophy. Magn Reson Med 44:655-659 (2000).

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