Biophysics

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2007


Borthiry GR, Antholine WE, Kalyanaraman B, Myers JM, Myers CR. Reduction of hexavalent chromium by human cytochrome b5: Generation of hydroxyl radical and superoxide. Free Radic. Biol. Med. 42:738-755; discussion 735-737 (2007).

Grether DM, Plott CR, Rowe DB, Sereno MI, Allman JM. For a few dollars more: An fMRI study of selling in auctions. Exp. Econ. 10:105-122 (2007).

Grubina R, Huang Z, Shiva S, Joshi MS, Azarov I, Basu S, Ringwood LA, Jiang A, Hogg N, Kim-Shapiro DB, Gladwin MT. Concerted nitric oxide formation and release from the simultaneous reactions of nitrite with deoxy- and oxyhemoglobin. J. Biol. Chem. 282:12916-12927 (2007).

Hardy M, Chalier F, Ouari O, Finet JP, Rockenbauer A, Kalyanaraman B, Tordo P. Mito-DEPMPO synthesized from a novel NH2-reactive DEPMPO spin trap: a new and improved trap for the detection of superoxide. Chem. Commun. (Camb.) (10):1083-1085 (2007).

Hardy M, Rockenbauer A, Vasquez-Vivar J, Felix C, Lopez M, Srinivasan S, Avadhani N, Tordo P, Kalyanaraman B. Detection, characterization, and decay kinetics of ROS and thiyl adducts of mito-DEPMPO spin trap. Chem. Res. Toxicol. 20:1053-1060 (2007).

Horowitz S, Binion DG, Nelson V, Kanaa Y, Javadi P, Lazarova Z, Andrekopoulos C, Kalyanaraman B, Otterson MF, Rafiee P. Increased arginase activity and endothelial dysfunction in human inflammatory bowel disease. Am. J. Physiol. Gastrointest. Liver Physiol. 292:G1323-G1336 (2007).

Hyde JS, Froncisz W, Sidabras JW, Camenisch TG, Anderson JR, Strangeway RA. Microwave frequency modulation in CW EPR at W-band using a loop-gap resonator. J. Magn. Reson. 185:259-263 (2007).

Kalyanaraman B. Iron signaling and oxidant damage. Cardiovasc. Toxicol. 7:92-94 (2007).

Kettenhofen NJ, Broniowska KA, Keszler A, Zhang Y, Hogg N. Proteomic methods for analysis of S-nitrosation. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 851:152-159 (2007).

Kotamraju S, Williams CL, Kalyanaraman B. Statin-induced breast cancer cell death: Role of inducible nitric oxide and arginase-dependent pathways. Cancer Res. 67:7386-7394 (2007).

Kufahl PR, Rowe DB, Li S-J. Processing of drug-induced BOLD responses with Bayesian source separation. Digital Signal Processing 17:975-978 (2007).

Kumar A, Periyannan GR, Narayanan B, Kittell AW, Kimm JJ, Bennett B. Experimental evidence for a metallohydrolase mechanism in which the nucleophile is not delivered by a metal ion: EPR spectrokinetic and structural studies of aminopeptidase from Vibrio proteolyticus. Biochem. J. 403:527-536 (2007).

Martinho M, Choi DW, Dispirito AA, Antholine WE, Semrau JD, Münck E. Mössbauer studies of the membrane-associated methane monooxygenase from Methylococcus capsulatus bath: Evidence for a Diiron center. J. Am. Chem. Soc. 129:15783-15785 (2007).

Mett RR, Sidabras JW, Hyde JS. Uniform radio frequency fields in loop-gap resonators for EPR spectroscopy. Appl. Magn. Reson. 31:571-587 (2007).

Migrino RQ, Aggarwal D, Konorev E, Brahmbhatt T, Bright M, Kalyanaraman B. Early detection of doxorubicin cardiomyopathy using two-dimensional strain echocardiography. Ultrasound Med. Biol. 34:208-214 (2007).

Nencka AS, Rowe DB. Reducing the unwanted draining vein BOLD contribution in fMRI with statistical post-processing methods. Neuroimage 37:177-188 (2007).

Pistolesi S, Pogni R, and Feix JB. Membrane insertion and bilayer perturbation by antimicrobial peptide CM15D. Biophys. J. 93:1651-1660 (2007).

Romero N, Peluffo G, Bartesaghi S, Zhang H, Joseph J, Kalyanaraman B, Radi R. Incorporation of the hydrophobic probe N-t-BOC-l-tyrosine tert-butyl ester to red blood cell membranes to study peroxynitrite-dependent reactions. Chem. Res. Toxicol. 20:1638-1648 (2007).

Rowe DB, Meller CP, Hoffmann RG. Characterizing phase-only fMRI data with an angular regression model. J. Neurosci. Methods 161:331-341 (2007).

Rowe DB, Nencka AS, Hoffmann RG. Signal and noise of Fourier reconstructed fMRI data. J. Neurosci. Methods 159:361-369 (2007).

Sidabras JW, Mett RR, Froncisz W, Camenisch TG, Anderson JR, Hyde JS. Multipurpose loop-gap and cylindrical TE011 resonators for aqueous samples at 94 GHz. Rev. Sci. Instrum. 78:034709 (2007).

Subczynski WK, Wisniewska A, Hyde JS, Kusumi A. Three-dimensional dynamic structure of the liquid-ordered domain in lipid membranes as examined by pulse-EPR oxygen probing. Biophys. J. 92:1573-1584 (2007).

Thomas S, Kotamraju S, Zielonka J, Harder DR, Kalyanaraman B. Hydrogen peroxide induces nitric oxide and proteosome activity in endothelial cells: A bell-shaped signaling response. Free Radic. Biol. Med. 42:1049-1061 (2007).

Whitsett J, Picklo MJ Sr, Vasquez-Vivar J. 4-hydroxy-2-nonenal increases superoxide anion radical in endothelial cells via stimulated GTP cyclohydrolase proteasomal degradation. Arterioscler. Thromb. Vasc. Biol. 27:2340-2347 (2007).

Widomska J, Raguz M, Dillon J, Gaillard ER, Subczynski WK. Physical properties of the lipid bilayer membrane made of calf lens lipids: EPR spin labeling studies. Biochim. Biophys. Acta 1768:1454-1465 (2007).

Widomska J, Raguz M, Subczynski WK. Oxygen permeability of the lipid bilayer membrane made of calf lens lipids. Biochim. Biophys. Acta 1768:2635-2645 (2007).

Xu Y, Kalyanaraman B. Synthesis and ESR studies of a novel cyclic nitrone spin trap attached to a phosphonium group-a suitable trap for mitochondria-generated ROS? Free Radic. Res. 41:1-7 (2007).

Xu Y, Wu G, Rowe DB, Ma Y, Zhang R, Xu G, Li S-J. COMBE: Complex model based estimation of thermal noise for fMRI data in the presence of artifacts. Magn. Reson. Imaging 25:1079-1088 (2007).

Zhu H, Ibrahim JG, Tang N, Rowe DB, Hau X, Bansal R, Peterson BS. A statistical analysis of brain morphology using wild bootstrapping. IEEE Trans. Med. Imaging 26:954-966 (2007).

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